<?xml version="1.0" encoding="utf-8" ?><rss version="2.0" xmlns:atom="http://www.w3.org/2005/Atom" xmlns:r="https://r-universe.dev"><channel><title>kiloni.r-universe.dev</title><link>https://kiloni.r-universe.dev</link><description>Recent package updates in kiloni</description><generator>R-universe</generator><image><url>https://github.com/kiloni.png</url><title>R packages by kiloni</title><link>https://kiloni.r-universe.dev</link></image><lastBuildDate>Tue, 28 Apr 2026 12:52:35 GMT</lastBuildDate><item><title>[bioc] TBSignatureProfiler 1.25.0</title><author>kiloni.quiles@rutgers.edu (Kiloni Quiles)</author><description>Gene signatures of TB progression, TB disease, and other
TB disease states have been validated and published previously.
This package aggregates known signatures and provides
computational tools to enlist their usage on other datasets.
The TBSignatureProfiler makes it easy to profile RNA-Seq data
using these signatures and includes common signature profiling
tools including ASSIGN, GSVA, and ssGSEA. Original models for
some gene signatures are also available.  A shiny app provides
some functionality alongside for detailed command line
accessibility.</description><link>https://github.com/r-universe/bioc/actions/runs/38123438802</link><pubDate>Tue, 28 Apr 2026 12:52:35 GMT</pubDate><r:package>TBSignatureProfiler</r:package><r:version>1.25.0</r:version><r:status>success</r:status><r:repository>https://bioc.r-universe.dev</r:repository><r:upstream>https://github.com/bioc/TBSignatureProfiler</r:upstream><r:article><r:source>tbspVignetteT.Rmd</r:source><r:filename>tbspVignetteT.html</r:filename><r:title>Introduction to the TBSignatureProfiler</r:title><r:created>2024-12-18 19:01:26</r:created><r:modified>2024-12-18 19:01:26</r:modified></r:article></item></channel></rss>